************************************************* * PROSITE protein families and domains database * ************************************************* FTP site: Organization Swiss Institute of Bioinformatics Address ftp.expasy.org Directory /databases/prosite This directory contains the following subdirectories: +-prosite--+ updated version of the PROSITE release (updated roughly | every 2 weeks); this is the same version as the one | that can be queried through http://www.expasy.org/prosite/. | | | |--old_releases gzipped 'tar' (archive) files of previous releases of PROSITE. | Each release is stored in a file with the name: prositeXX_X.tar.gz | where "XX_X" is the release number. Each release file contains | prosite.doc, prosite.dat and since release 20.0 prorule.dat. | | +--tools--+ +--ps_scan binaries and source code of the reference PROSITE scanning tool Directory /databases/prosite File name Description ------------ -------------------------------------------------------------------- prosite.doc PROSITE documentation file prosite.dat PROSITE data file prorule.dat PROSITE ProRule file prosite_alignments.tar.gz Multiple sequence alignment files sequence_logos.tar.gz Sequence logos prosuser.htm User manual psrelnot.htm Release notes prosite_license.htm PROSITE license conditions profile.txt Syntax for the profiles in PROSITE unirules.pdf Syntax for the rules in ProRule prosite.lis List of documentation entries pautindx.txt Authors index experts.txt List of on-line experts for PROSITE and Swiss-Prot jourlist.txt List of abbreviations for journals cited psdelac.txt List of PROSITE accession numbers which have been deleted ------------------------------------------------------------------------ PROSITE is copyright. It is produced by the Swiss Institute of Bioinformatics (SIB). There are no restrictions on its use by non-profit institutions as long as its content is in no way modified. Usage by and for commercial entities requires a license agreement. For information about the licensing scheme send an email to license@isb-sib.ch or see: http://www.expasy.org/prosite/prosite_license.htm. ------------------------------------------------------------------------