ORGANISM NAME: Crassostrea gigas ORGANISM COMMON NAME: Pacific oyster TAXID: 29159 ANNOTATION RELEASE NAME: NCBI Crassostrea gigas Annotation Release 100 ANNOTATION EVIDENCE FREEZE DATE: 25 February 2015 ANNOTATION RELEASE DATE: 27 February 2015 ANNOTATION REPORT: http://www.ncbi.nlm.nih.gov/genome/annotation_euk/Crassostrea_gigas/100/ ANNOTATED ASSEMBLIES: * REFERENCE: ASSEMBLY NAME: oyster_v9 ASSEMBLY ACCESSION: GCF_000297895.1 ASSEMBLY SUBMITTER: BGI-Shenzhen ASSEMBLY DATE: 19 September 2012 ASSEMBLY TYPE: Haploid NUMBER OF ASSEMBLY-UNITS: 2 ##Below is a 2 column list with assembly-unit id and name. ##The Primary Assembly unit is listed first. GCF_000297905.1 Primary Assembly GCF_000028115.1 non-nuclear ====================================================================== Note: May 4, 2015 - update for protein.gbk.gz The protein.gbk.gz file in the protein directory was regenerated to correct an error in the source for the protein (DBSOURCE and coded_by fields). For some proteins, the scaffold on which the protein is annotated was used as the source rather than the transcript. The full list of changes includes: * corrected DBSOURCE to RefSeq transcripts instead of scaffolds * removed unexpected PUBLICATIONS propagated from the scaffolds * corrected CDS feature annotation, including: coded_by to range on the RefSeq transcripts instead of scaffolds corrected CDS range (if different than the genome length) removed 'Derived by automated computational analysis using gene prediction method: Gnomon' note on CDS removed /inference and /exception on CDS removed some db_xrefs that are present on genome but missing on known RefSeq (NP_s) used native known RefSeq markup for gene names and such when they differ from what was annotated on the genome added CDS feature to organelle proteins